CryoSPARC Guide
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  • About CryoSPARC™
  • Changelogarrow-up-right-from-square
  • Licensingchevron-right
  • Setup, Configuration and Management
    • CryoSPARC Architecture and System Requirements
    • CryoSPARC Installation Prerequisites
    • How to Download, Install and Configurechevron-right
    • Deploying CryoSPARC on AWSchevron-right
    • Using CryoSPARC with Cluster Management Software
    • Software Updates and Patches
    • Management and Monitoringchevron-right
    • Software System Guideschevron-right
    • Troubleshooting
  • Application Guide (v4.0+)
    • A Tour of the CryoSPARC Interface
    • Browsing the CryoSPARC Instance
    • Projects, Workspaces and Live Sessions
    • Jobs
    • Job Views: Cards, Tree, and Table
    • Creating and Running Jobs
    • Low Level Results Interface
    • Filters and Sorting
    • View Options
    • Tags
    • Flat vs Hierarchical Navigation
    • File Browser
    • Blueprints
    • Workflows
    • Inspecting Data
    • Managing Jobs
    • Interactive Jobs
    • Upload Local Files
    • Managing Data
    • Downloading and Exporting Data
    • Instance Management
    • Admin Panel
  • Cryo-EM Foundations
    • Image Formationchevron-right
  • Expectation Maximization in Cryo-EM
  • Processing Data in cryoSPARC
    • Get Started with CryoSPARC: Introductory Tutorial (v4.0+)
    • Tutorial Videos
    • All Job Types in CryoSPARCchevron-right
      • Importchevron-right
      • Motion Correctionchevron-right
      • CTF Estimationchevron-right
      • Exposure Curationchevron-right
      • Particle Pickingchevron-right
      • Extractionchevron-right
      • Deep Pickingchevron-right
      • Particle Curationchevron-right
      • 3D Reconstructionchevron-right
      • 3D Refinementchevron-right
      • CTF Refinementchevron-right
      • Conformational Variabilitychevron-right
      • Postprocessingchevron-right
      • Local Refinementchevron-right
      • Helical Reconstructionchevron-right
      • Utilitieschevron-right
      • Simulationschevron-right
    • Automated Workflows
    • CryoSPARC Tools
    • Data Processing Tutorialschevron-right
    • Webinar Recordings
  • Real-time processing in cryoSPARC Live
    • About CryoSPARC Live
    • Prerequisites and Compute Resources Setup
    • How to Access CryoSPARC Live
    • UI Overview
    • New Live Session: Start to Finish Guide
    • CryoSPARC Live Tutorial Videos
    • Live Jobs and Session-Level Functions
    • Performance Metrics
    • Managing a CryoSPARC Live Session from the CLI
    • FAQs and Troubleshooting
  • Guides for v3
    • v3 User Interface Guidechevron-right
    • Tutorial: Job Builder
    • Get Started with CryoSPARC: Introductory Tutorial (v3)
    • Tutorial: Manually Curate Exposures (v3)
  • Resources
    • Questions and Support
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  1. Processing Data in cryoSPARC

All Job Types in CryoSPARC

Details on all of the available job types in CryoSPARC, when to use them, required inputs, parameter explanations, and common next steps.

Importchevron-rightMotion Correctionchevron-rightCTF Estimationchevron-rightExposure Curationchevron-rightParticle Pickingchevron-rightExtractionchevron-rightDeep Pickingchevron-rightParticle Curationchevron-right3D Reconstructionchevron-right3D Refinementchevron-rightCTF Refinementchevron-rightConformational Variabilitychevron-rightPostprocessingchevron-rightLocal Refinementchevron-rightHelical Reconstructionchevron-rightUtilitieschevron-rightSimulationschevron-right
PreviousTutorial Videoschevron-leftNextImportchevron-right

Last updated 1 year ago