CryoSPARC Guide
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CryoSPARC Guide
About cryoSPARC
Current Version
Licensing
Setup, Configuration and Management
Hardware and System Requirements
cryoSPARC Installation Prerequisites
How to Download, Install and Configure
Software Updates
Management and Monitoring
Environment variables
(Optional) cryoSPARC and systemd
cryosparcm reference
cryosparcm cli reference
cryosparcw reference
Unix permissions and data access control
Performance Metrics
Troubleshooting
Deployment Guides
Deploying cryoSPARC on AWS
Processing Data in cryoSPARC
Cryo-EM Data Processing in cryoSPARC: Introductory Tutorial
User Interface and Usage Guide
All Job Types in cryoSPARC
Tutorial Videos and Webinars
Tutorials and Usage Guides
Real-time processing in cryoSPARC Live
About cryoSPARC Live
Prerequisites and Compute Resources Setup
How to Access cryoSPARC Live
UI Overview
Live Jobs and Session-Level Functions
New Live Session: Start to Finish Guide
Tutorial Videos
Performance Metrics
FAQs and Troubleshooting
Cryo-EM Data Processing Explained
Questions and Support
cryoSPARC Discussion Forum
cryoSPARC Blog
cryoSPARC Homepage
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Management and Monitoring
Instructions for accessing and working in the cryoSPARC command line.

Environment variables

Specify additional environment variables in the configuration files to augment cryoSPARC's low-level behaviour.

(Optional) cryoSPARC and systemd

See more details here:

cryosparcm, cryosparcm cli and cryosparcw references

Workstations or master nodes with a cryosparc_master installation have access to cryosparcm, cryoSPARC's built-in command-line utility for all administrative, management and advanced usage tasks.
The cryosparcm cli command provides an extensive API for programmatically controlling cryoSPARC from the command-line.
Workstations or worker nodes with a cryosparc_worker installation have access to cryosparcw, a utility similar to cryosparcm for managing worker installations.
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Environment variables
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Environment variables
(Optional) cryoSPARC and systemd
cryosparcm, cryosparcm cli and cryosparcw references