Tutorials and Case Studies

Installation, Setup and User Management
Tutorial: Verify cryoSPARC Installation with the Extensive Workflow (Sysadmin Guide)
/processing-data/tutorials-and-case-studies/tutorial-verify-cryosparc-installation-with-the-extensive-workflow-sysadmin-guide
Tutorial: User Management
/processing-data/tutorials-and-case-studies/tutorial-user-management
Introduction to cryoSPARC
User Interface and Usage Guide
/processing-data/user-interface-and-usage-guide
Cryo-EM Data Processing in cryoSPARC: Introductory Tutorial
/processing-data/cryo-em-data-processing-in-cryosparc-introductory-tutorial
Tutorial: Job Builder
/processing-data/tutorials-and-case-studies/job-builder-tutorial
Case Study: Processing EMPIAR-10291 (300 Micrographs) to 3.4Å in 1 hour 25 minutes
/processing-data/tutorials-and-case-studies/case-study-processing-empiar-10291-300-micrographs-to-3.4a-in-1-hour-25-minutes
Data Processing
Alongside these tutorials, see: All Job Types in cryoSPARC and Tutorial Videos​
Files, Data and Import
Tutorial: Negative Stain Data
/processing-data/tutorials-and-case-studies/negative-stain-data
Tutorial: Phase Plate Data
/processing-data/tutorials-and-case-studies/phase-plate-data
Tutorial: EER File Support
/processing-data/tutorials-and-case-studies/tutorial-eer-file-support
Preprocessing
Tutorial: Patch Motion and Patch CTF
/processing-data/tutorials-and-case-studies/tutorial-patch-motion-and-patch-ctf
Tutorial: Manually Curate Exposures
/processing-data/tutorials-and-case-studies/tutorial-manually-curate-exposures
Particle Picking
Tutorial: Particle Picking Calibration
/processing-data/tutorials-and-case-studies/tutorial-particle-picking-calibration
Ab-Initio Reconstruction
Case Study: Previously unknown conformation of AAA+ unfoldase discovered using cryoSPARC
https://cryosparc.com/blog/aaa-discovered-using-cryosparc
cryosparc.com
Helical Reconstruction
Case Study: EMPIAR-10031 (MAVS)
/processing-data/all-job-types-in-cryosparc/helical-reconstruction-beta/case-study-empiar-10031-mavs
3D Refinement
Tutorial: CTF Refinement
/processing-data/tutorials-and-case-studies/tutorial-ctf-refinement
Local Refinement
Case Study: Yeast U4/U6.U5 tri-snRNP
/processing-data/tutorials-and-case-studies/case-study-yeast-u4-u6.u5-tri-snrnp
Variability Analysis
Tutorial: 3D Variability Analysis (Part One)
/processing-data/tutorials-and-case-studies/tutorial-3d-variability-analysis-part-one
Tutorial: 3D Variability Analysis (Part Two)
/processing-data/tutorials-and-case-studies/tutorial-3d-variability-analysis-part-two
Software and Data Management
Software Utility Features
Tutorial: Queuing Directly to a GPU
/processing-data/tutorials-and-case-studies/tutorial-queuing-directly-to-a-gpu
Tutorial: SSD Particle Caching in cryoSPARC
/processing-data/tutorials-and-case-studies/tutorial-ssd-particle-caching-in-cryosparc
Tutorial: Priority Job Queuing
/processing-data/tutorials-and-case-studies/tutorial-priority-job-queuing
Data Management, Import and Export
Tutorial: Data Management in cryoSPARC
/processing-data/tutorials-and-case-studies/tutorial-data-management-in-cryosparc
Tutorial: CryoSPARC Live Session Data Management
/processing-data/tutorials-and-case-studies/cryosparc-live-session-data-management
Tutorial: Manipulating .cs Files Created By cryoSPARC
/processing-data/tutorials-and-case-studies/manipulating-.cs-files-created-by-cryosparc
Tutorial: Migrating your cryoSPARC Instance
/processing-data/tutorials-and-case-studies/tutorial-migrating-your-cryosparc-instance
Resource Manager
Tutorial: Verify cryoSPARC Installation with the Extensive Workflow (Sysadmin Guide)
Last updated 1 month ago