CryoSPARC Tools

cryosparc-tools is an open-source Python library that enables powerful scripting access to CryoSPARC and is available for CryoSPARC v4.1+.
Use cases: 
Programmatically read and write exposure, particle and volume data
Easily perform advanced operations on metadata (alignments, CTF, etc) and programmatically insert modified data back into CryoSPARC
Access project, workspace and job data
Build and run jobs to orchestrate custom cryo-EM workflows
Extend CryoSPARC functionality with third-party software packages
cryosparc-tools is on GitHub and available via pip and can be used outside of the CryoSPARC environment in your own programs and tools
The full documentation for cryosparc-tools is hosted at
 https://tools.cryosparc.com/​
cryosparc-tools source code is hosted on Github.
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If you are using CryoSPARC v4.0 or older, please see: 
Guide: Manipulating .cs Files Created By CryoSPARC
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Last modified 5mo ago