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CryoSPARC Tools
cryosparc-tools is an open-source Python library that enables powerful scripting access to CryoSPARC and is available for CryoSPARC v4.1+.
Use cases:
- Programmatically read and write exposure, particle and volume data
- Easily perform advanced operations on metadata (alignments, CTF, etc) and programmatically insert modified data back into CryoSPARC
- Access project, workspace and job data
- Build and run jobs to orchestrate custom cryo-EM workflows
- Extend CryoSPARC functionality with third-party software packages
- cryosparc-tools is on GitHub and available via
pipand can be used outside of the CryoSPARC environment in your own programs and tools
If you are using CryoSPARC v4.0 or older, please see: