Interactive Job: Inspect Particle Picks

Inspect and adjust particle picks.

The information in this section applies to CryoSPARC ≤v3.3. For CryoSPARC v4.0+, please see: Interactive Jobs


  • Inspect and modify picks using various thresholds following auto-picking.


  • Previously picked particles

  • Aligned/motion-corrected micrographs

Common Parameters

  • Once the job is running, you can adjust the lowpass filter, normalized cross correlation (NCC) and power threshold sliders to better view the picks and/or remove false positives.

  • Learn about calibrating pick scores against defocus values in this tutorial


  • Particle locations

Common Next Steps

  • Extract particles from micrographs

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