Job: Particle Sets Tool

Split a particle group into subsets or compare two groups.

Description

Split a particle group into subsets or compare two groups.

Inputs

particles_A: Particles
- With only this group $A$ specified, choose the split action to split the data into multiple batches
particles_B: Particles (optional)
- With both groups $A$ and $B$ , choose the intersect action to compute set operations on the two groups, including (i) intersection $A ∩ B$ and differences (ii) $A - B$ and (iii) $B - A$ .

Common Parameters

Action
- With only one particle input group, choose split to split the data into multiple batches
- With both particle input groups, choose intersect to compute the set intersection and difference between the two groups.
- if intersect is selected, a new parameter is available: Field to Intersect
  - uid: use the uid field to intersect the two inputs
  - path : use the particle's path and image index to intersect the two inputs.
    The token used to intersect particles will be a concatenation of the particle's path from blob/path and its index from blob/idx.
Split num. batches: With the split action, how many batches to split the particles into
Split batch size: With the split action, the number of items to place into each split batch that is output. Additional items will be output as a separate remainder output. If the value is None, the items will be split into equal sized batches.
Split randomize: With the split action, randomize the particles to add to each batch

Outputs

Split mode:
- split_X (multiple outputs): With the split action, batches of the resulting particles
- remainder: With the split action, particles left out of split_X batches due to the specified batch size and number of batches
Intersect mode:
- - For the intersect output, all of the result groups in common from set A and B (e.g. blob, ctf, alignments3D, etc.) and passthrough groups will be copied from set A
  - For the intersect_B output, all of the result and passthrough groups will be copied from set B

Common Next Steps

2D Classification

PreviousJob: Check for Corrupt Particles NextJob: Reassign Particles to Micrographs

Last updated 6 months ago

Inputs

particles_A: Particles

With only this group $A$ specified, choose the split action to split the data into multiple batches

particles_B: Particles (optional)

With both groups $A$ and $B$ , choose the intersect action to compute set operations on the two groups, including (i) intersection $A ∩ B$ and differences (ii) $A - B$ and (iii) $B - A$ .

Common Parameters

Action

With only one particle input group, choose split to split the data into multiple batches
With both particle input groups, choose intersect to compute the set intersection and difference between the two groups.
if intersect is selected, a new parameter is available: Field to Intersect
- uid: use the uid field to intersect the two inputs
- path : use the particle's path and image index to intersect the two inputs.
  - The token used to intersect particles will be a concatenation of the particle's path from blob/path and its index from blob/idx.

Split num. batches: With the split action, how many batches to split the particles into

Split batch size: With the split action, the number of items to place into each split batch that is output. Additional items will be output as a separate remainder output. If the value is None, the items will be split into equal sized batches.

Split randomize: With the split action, randomize the particles to add to each batch

Outputs

Split mode:

split_X (multiple outputs): With the split action, batches of the resulting particles
remainder: With the split action, particles left out of split_X batches due to the specified batch size and number of batches

Intersect mode:

intersect and intersect_B outputs: With the intersect action, these contain the result of $A ∩ B$
- For the intersect output, all of the result groups in common from set A and B (e.g. blob, ctf, alignments3D, etc.) and passthrough groups will be copied from set A
- For the intersect_B output, all of the result and passthrough groups will be copied from set B
A_minus_B: With the intersect action, set difference $A - B$
B_minus_A: With the intersect action, set difference $B - A$